Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908926.1_cds_XP_016459165.1_52721
CDS Infomation

[gene=LOC107782743] [db_xref=GeneID:107782743] [protein=U-box domain-containing protein 9-like] [protein_id=XP_016459165.1] [location=join(130224..130529,131941..133023)] [gbkey=CDS]
Sequence

ATGGCGAAAACCACCGTAGAGGGAGGAGGAGGGCTGCCGGCGGCGGCTAAAGAGGCGGCA
GAACTGAAAAAGGAGTTGCAGAGAGCAGTAAAGGCTGTAGTTGAAGACGATGATTACAGT
TTAGAAGCCACCGATCGAGCCATGCAGTGTTTATGTGCTTTAAAAGAATTGAAATTGAAA
CCTTTGAATTCAAATCCTCTTGATATTCGTAGCCTTTCTTTGAGTTTACCAATTCCACCC
AATGAATTTGTTTGTCCAATTTCTGGTCAGCTTATGAAAGACCCTGTTGTTTTGGCTTCT
GGCCTGACATATGACAGACCATTCATTCAAAAGTGGCTGAAGGATGGCCATCGTACGTGC
CCTGAAACAAAGCAGGTTCTTTCCCATTCAGTTCTCACCCCAAATCATCTTGTGAGAAAA
ATGATTTCACATTGGTGCCAGAAGCATGGAATTGAGCTGCCCGGCCCTTCTCATGATGAG
GACCATGATATAATCACAAACGCAGACCGAGATCGTTTAAATTTACTGCTTGAGATATTG
TCCTCTAGTAATGTTTTGGAGCAGAAAAAAGCTGCAAAAGAAGTTCGCGTTCTGACTAAA
CAGATGCCATCTCTACGGGCTGTTTTCGGGGAGTGCAATGATGCCATTACCAAATTGCTC
AATCCTCTATTGTCTGGTAACGTGAGTAATCATCCTGATCTACAAGAAGATTTGGTCACA
GCAGTTCTGAACATCTCAATACATGACAGCAATAAAAAGCTAATAGCTGAAAATCCTGTT
GTCGTTCCTTTACTCATTGAGTCGTTGAAGTTCGGAACGCTTGAAACAAGAAGCAATTCT
GCTGCTGCTCTCTTCACATTATCAGCACTTGATTCAAACAAGCATATTATCACAAAGGCA
GGTGCTCTCAAGCCTTTAATCGACCTTTTGAATGAGGGACAACCATTGGCCATGAAAGAT
GCTGCTTCCGCAATTTTTAATCTGAGCATTGTCCACGAGAATAAGGGTAAAGCTGTCGCC
GAAGGAGCAATAAAGGTGATTATGAAGAAGATCAGGGGTCGCGTACTCATTGACGAGTTA
TTAGCTATTCTTGCCCTGCTGTCCAGTCATCACAAGGCAATCGAGGAGATGGGGGAGCTG
GGTGCAGTCTCTTGTCTCCTAAGTATCATAAACGAGGACACAAGTGATCGCAACAAGGAG
AACTGCATCGCAATCCTCTACACGATGTGTTATAATGATCGTACAAAGTTGAGAGAGATC
TGGTTAGATGAGAGTGTCAATGGGACGATATCTAGTCTTGCTCAAAGTGGGACCTCTAGA
GCCAAGAGGAAGGCGAATGGCATTCTTGAGCGGCTAGATAGATATGTTTCTCTTGTGCAC
ACTACTTGA

Peptide Sequence

PEP ID

XP_016459165.1
PEP Infomation

PREDICTED: U-box domain-containing protein 9-like [Nicotiana tabacum]
Sequence

MAKTTVEGGGGLPAAAKEAAELKKELQRAVKAVVEDDDYSLEATDRAMQCLCALKELKLK
PLNSNPLDIRSLSLSLPIPPNEFVCPISGQLMKDPVVLASGLTYDRPFIQKWLKDGHRTC
PETKQVLSHSVLTPNHLVRKMISHWCQKHGIELPGPSHDEDHDIITNADRDRLNLLLEIL
SSSNVLEQKKAAKEVRVLTKQMPSLRAVFGECNDAITKLLNPLLSGNVSNHPDLQEDLVT
AVLNISIHDSNKKLIAENPVVVPLLIESLKFGTLETRSNSAAALFTLSALDSNKHIITKA
GALKPLIDLLNEGQPLAMKDAASAIFNLSIVHENKGKAVAEGAIKVIMKKIRGRVLIDEL
LAILALLSSHHKAIEEMGELGAVSCLLSIINEDTSDRNKENCIAILYTMCYNDRTKLREI
WLDESVNGTISSLAQSGTSRAKRKANGILERLDRYVSLVHTT

Transcript Sequence

Gene sequence data has not been registered.